Associate Professor Glenn Stone

Biography

Dr Glenn Stone is an Associate Professor in the School of Computing and Mathematics. He holds a BA in Mathematics (Oxford), an MSc in Computer Science (Manchester) and a PhD in Statistics (Bath). After a period of teaching Statistics at the University of Bath, he moved to Australia and joined the CSIRO in 1993. There he worked on the development and application of statistical methods for a wide range of areas, including spatial smoothing, data mining, insurance risk and biostatistics. From 1999 to 2003 he was a Principal Research Analyst at Insurance Australia Group, returning to CSIRO in 2003 to work in bioinformatics and biostatistics, and more recently remote sensing. He joined UWS in 2011.

Areas of Research

Computationally intensive statistical methods with applications in;

Selected Publications

http://www.researcherid.com/rid/A-5948-2009

KS Kassahn, MJ Caley, AC Ward, AR Connolly, G Stone, and RH Crozier. "Heterologous microarray experiments used to identify the early gene response to heat stress in a coral reef fish." Molecular Ecology, 16(8), 2007.

KS Kassahn, RH Crozier, AC Ward, G Stone, and MJ Caley. "From transcriptome to biological function: environmental stress in an ectothermic vertebrate, the coral reef fish pomacentrus moluccensis." BMC Genomics, 8, 2007.

KL Mcdonald, MG O'Sullivan, JF Parkinson, JM Shaw, CA Payne, JM Brewer, L Young, DJ Reader, HT Wheeler, RJ Cook, MT Biggs, NS Little, C Teo, G Stone, and BG Robinson. "IQGAP1 and IGFBP2: Valuable biomarkers for determining prognosis in glioma patients." Journal of Neuropathology and Experimental Neurology, 66(5), 2007.

P Humburg, D Bulger, and G Stone. "Parameter estimation for robust hmm analysis of chip-chip data." BMC Bioinformatics, 9, 2008.

AE Nelson, U Meinhardt, JL Hansen, IH Walker, G Stone, CJ Howe, KC Leung, MJ Seibel, RC Baxter, DJ Handelsman, R Kazlauskas, and KK Ho. "Pharmacodynamics of growth hormone abuse biomarkers and the influence of gender and testosterone: A randomized double-blind placebo-controlled study in young recreational athletes." Journal of Clinical Endocrinology and Metabolism, 93(6), 2008.

CA Payne, S Maleki, M Messina, MG O'Sullivan, G Stone, NR Hall, JF Parkinson, HR Wheeler, RJ Cook, MT Biggs, NS Little, C Teo, Robinson BG, and KL McDonald. "Loss of prostaglandin d-2 synthase: a key molecular event in the transition of a low-grade astrocytoma to an anaplastic astrocytoma." Molecular Cancer Therapeutics, 7(10), 2008.

JW Wynne, MG O'Sullivan, MT Cook, G Stone, BF Nowak, DR Lovell, and NG Elliott. "Transcriptome analyses of amoebic gill disease-affected Atlantic salmon (salmo salar) tissues reveal localized host gene suppression." Marine Biotechnology, 10(4), 2008.

JW Wynne, MG O'Sullivan, G Stone, MT Cook, BF Nowak, DR Lovell, RS Taylor, and NG Elliott. "Resistance to amoebic gill disease (AGD) is characterised by the transcriptional dysregulation of immune and cell cycle pathways." Developmental and Comparative Immunology, 32(12), 2008.

D Clifford, G Stone, I Montoliu, S Rezzi, FP Martin, P Guy, S Bruce, and S Kochhar. "Alignment using variable penalty dynamic time warping." Analytical Chemistry, 81(3), 2009.

LM Bragg and G Stone. "k-link EST clustering: evaluating error introduced by chimeric sequences under different degrees of linkage." Bioinformatics, 25(18), 2009.

G Stone, B Chapman, and D Lovell. "Development of a log-quadratic model to describe microbial inactivation, illustrated by thermal inactivation of clostridium botulinum." Applied and Environmental Microbiology, 75, 2009.

CJ Mitchell, AE Nelson, MJ Cowley, W Kaplan, G Stone, SK Sutton, A Lau, CMY Lee, and KKY Ho. "Detection of growth hormone doping by gene expression profiling of peripheral blood." Journal of Clinical Endocrinology and Metabolism, 94(12), 2009.

V Reja, A Kwok, G Stone, L Yang, B Bassam, A Missel and C Menzel "ScreenClust: Advanced statistical software for supervised and unsupervised high resolution melting (HRM) analysis" Methods, 50(4), 2010.

P Humburg, CA Helliwell, D Bulger, and G Stone. "ChIPseqR: Analysis of ChIP-seq experiments." BMC Bioinformatics, 12(39), 2011.

SA Olivier, MK Bull, G Stone, RJ van Diepenbeek, F Kormelink, L Jacops, B Chapman. "Strong and Consistently Synergistic Inactivation of Spores of Spoilage-Associated Bacillus and Geobacillus spp. by High Pressure and Heat Compared with Inactivation by Heat Alone." Applied and Environmental Microbiology, 77(7), 2011.

Software